myCSG © |Area: SDTM| Concept: PE : Physical Examination | Lesson: L101 : Physical Examination - L101 |

  • Complete key programming of PE domain
  • Programming includes:
    • Derivation of --LOBXFL as per SDTM IG 3.3
    • Study day creation
    • --SEQ variable creation
    • And other general SDTM variables of PE domain

PHYSEXAM : Physical Examination
Question Response
Date of Examination
[PEDAT_RAW]
Body System
[BODSYS]

Cardiovascular
Ear/Nose/Throat
Gastrointestinal
Respiratory
Central Nervous System
Musculoskelatal
Result
[RESULT]

Normal
Abnormal
If Abnormal, specify
[ABNSP]
If Abnormal, clinically signficant?
[CLSIG]

Yes
No



SUPPVARIABLE_NAMEVARIABLE_LABELTYPEGENERAL_COMMENTFORM_PHYSEXAM
_ STUDYID Study Identifier Char Populate as "statschoice"
_ DOMAIN Domain Abbreviation Char Populate as "PE"
_ USUBJID Unique Subject Identifier Char Concatenate STUDYID and SUBJECT with a hyphen in between.
_ PESEQ Sequence Number Num Sort the final dataset by USUBJID, PETESTCD, PEDTC and set to 1 on the first record of the subject and increment by 1 on subsequent records.
_ PETESTCD Body System Examined Short Name Char Populate as "ENT" when PETEST is "Ear/Nose/Throat".
Populate as "CNS" when PETEST is "Central Nervous System".
For other PETEST values, populate with the first eight characters of PETEST in upper case.
_ PETEST Body System Examined Char Populate with the values from BODSYS variable.
_ PEORRES Verbatim Examination Finding Char Populate with the values from RESULT variable.
_ PESTRESC Character Result/Finding in Std Format Char Convert PEORRES to upper case.
_ PELOBXFL Last Observation Before Exposure Flag Char Populate as "Y" on the latest record on or before RFXSTDTC per subject and PETESTCD.
_ VISITNUM Visit Number Num Populate with the value from FOLDERSEQ variable.
_ VISIT Visit Name Char Populate with the value from FOLDERNAME variable.
_ PEDTC Date/Time of Examination Char Populate using PEDAT_RAW after converting to ISO 8601 format.
_ PEDY Study Day of Examination Num Derive study day for PEDTC.
x PEABNSP Abnormal Specify Num Populate using ABNSP variable
x PECLSIG Clinically Significant Num Populate as "Y" when CLSIG is "Yes", else if CLSIG="No" then populate as "N".
Complete SAS code to generate the output is available for registered users!

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